Cite this work:
Sacal, Moises (2017) Sample dataset OMERO. University of Technology Sydney. Datacrate. https://dx.doi.org/10.5281/zenodo.1009240
This catalog file describes a dataset. It uses the Draft DataCrate Packaging format v0.2.
This file was made with Calcyte.
A machine-readable version of this page is available: CATALOG.json| @type | Dataset |
|---|---|
| name | Sample dataset OMERO |
| description | This is sample data of OMERO |
| datePublished | 2017-06-29 |
| creator | Moises Sacal |
| path | . |
| isOutputOf | DataCrate |
| contact | Moises Sacal |
| contentLocation | University of Technology Sydney |
| hasPart | images |
| keywords | OMERO |
| publisher | University of Technology Sydney |
| relatedLink | Moises Sacal |
| temporalCoverage | 2017 |
| @type | Dataset |
|---|---|
| description | This is a test datacrate of files pulled from OMERO |
| path | data |
| startTime | 2016-01-21T11:00:00+11:00 |
| endTime | 2016-11-21T11:00:00+11:00 |
| hasPart | data/treat3.dv , data/treat1.tif , data/treat2.dv , control/control1.dv , control/control2.tif |
| funder | University of Technology Sydney |
Files:
| @type | File |
|---|---|
| description | Resolve3D Snapshot Image Microscopic views of P. aeruginosa colony morphologies after overnight incubation at 37 mC. Surface-grown colonies of PAK (wild-type) |
| thumbnail |
|
| creator | Moises Sacal |
| path | treat3.dv |
| category | PROCESSED |
| fileFormat | text/plain |
| omeroName | 150708_FishOldProbes_FTIC_Eurb388_02_snapshot_R3D.dv |
| omeroId | 1130 |
| omeroAuthor | Christian Evenhuis |
| omeroGroup | default |
| omeroDataset | Filename example |
| omeroProject | training |
| dateUploaded | 2018-02-07T10:32:45 |
| dateCreated | 2018-02-07T10:32:45 |
| channels | POL , FITC , DAPI |
| LabBookID | 10 |
| LabBookPage | 10 |
| Organism | Pseudomonas aeruginosa |
| Temperature | 25 |
| RDMP | https://redbox.research.uts.edu.au/redbox/dashboard/detail/0fa1c4006e19507e6ead756f18f79772/ |
| DateOfExperiment | 150708 |
| Probe | FishOldProbes |
| Dye | FTIC |
| Replicate | 02 |
| @type | File |
|---|---|
| description | |
| thumbnail |
|
| creator | Moises Sacal |
| path | treat1.tif |
| category | PROCESSED |
| fileFormat | text/plain |
| omeroName | Berb 160 hoechst.tif |
| omeroId | 22422 |
| omeroAuthor | Christian Evenhuis |
| omeroGroup | default |
| omeroDataset | Berberine |
| dateUploaded | 2018-05-09T02:59:00 |
| dateCreated | 2018-05-21T20:56:35 |
| channels | 0 , 1 , 2 |
| @type | File |
|---|---|
| description | Resolve3D Snapshot Image |
| thumbnail |
|
| creator | Moises Sacal |
| path | treat2.dv |
| category | PROCESSED |
| fileFormat | text/plain |
| omeroName | 150707_FishOldProbes_FITC_Eurb338_02_snapshot_R3D.dv |
| omeroId | 1159 |
| omeroAuthor | Christian Evenhuis |
| omeroGroup | default |
| omeroDataset | Filename example |
| omeroProject | training |
| dateUploaded | 2018-02-07T10:33:23 |
| dateCreated | 2018-02-07T10:33:23 |
| channels | POL , FITC |
| LabBookID | 10 |
| LabBookPage | 10 |
| Organism | Pseudomonas aeruginosa |
| Temperature | 25 |
| RDMP | https://redbox.research.uts.edu.au/redbox/dashboard/detail/0fa1c4006e19507e6ead756f18f79772/ |
| DateOfExperiment | 150707 |
| Probe | FishOldProbes |
| Dye | Eurb338 |
| Replicate | 02 |
| @type | File |
|---|---|
| description | Resolve3D Snapshot Image |
| thumbnail |
|
| creator | Moises Sacal |
| path | control1.dv |
| category | PROCESSED |
| fileFormat | text/plain |
| omeroName | LongLead_gramNeg_03_snapshot_R3D.dv |
| omeroId | 17242 |
| omeroAuthor | Rosalia Cavaliere |
| omeroGroup | whitchurch |
| omeroDataset | TubeMic_001 |
| omeroProject | Cochlear |
| dateUploaded | 2018-05-09T09:45:59 |
| dateCreated | 2018-05-09T09:45:59 |
| channels | FITC , POL , CY-5 |
| @type | File |
|---|---|
| description | Imaris Snapshot |
| thumbnail |
|
| creator | Moises Sacal |
| path | control2.tif |
| category | PROCESSED |
| fileFormat | text/plain |
| omeroName | 2015-09-15_232_24h_Clathrin_001_007.tif |
| omeroId | 4128 |
| omeroAuthor | Christian Evenhuis |
| omeroGroup | djordjevic |
| omeroDataset | 2015-08-07 Caveolin and Clathrin |
| omeroProject | BR_2015 |
| dateUploaded | 2018-03-01T10:34:00 |
| dateCreated | 2018-03-01T10:34:00 |
| channels | 0 , 1 , 2 |
Contextual info: Organization
| @type | Organization |
|---|---|
| name | University of Technology Sydney |
| address | Broadway, 2007, NSW Australia |
Contextual info: Person
| @type | Person |
|---|---|
| name | Moises Sacal |
| affiliation | University of Technology Sydney |
| moises.sacal@uts.edu.au | |
| familyName | Sacal |
| givenName | Moises |